THE GHRB subfamily is characterized by the broadest substrate selectivity and highest diversity in function among 2HADHs. Members of the GHRB clade use a large variety of postulated physiological substrates, as diverse as glyoxylate, hydroxypyruvate, phosphonate, ᴅ-mandalate, 2-keto-ᴅ-gluconate, phenylpyruvate, or 3,4-dihydroxyphenylpyruvate. At the same time, they exhibit a high level of promiscuity, i.e., accept various secondary substrates, which occasionally appear as the most efficient substrates for close homologs. As hydroxypyruvate and glyoxylate constitute important compounds in various metabolic pathways, GHRB members play crucial roles in many biological processes.
Accession Protein name Subfamily Organism Kingdom Kinetically characterized substrates Highest efficiency substrate Structures
C7JFN2_ACEP3 D-isomer specific 2-hydroxyacid dehydrogenase GHRB Acetobacter pasteurianus IFO 3283-01 Bacteria - - -
acb:A1S_2248 2-keto-D-gluconate reductase GHRB Acinetobacter baumannii ATCC 17978 Bacteria - - -
HPR3_ARATH glyoxylate/hydroxypyruvate reductase HPR3 GHRB Arabidopsis thaliana (thale cress) Eukaryotes hydroxypyruvate, glyoxylate glyoxylate PMID:21205613
HPR1_ARATH HPR; hydroxypyruvate reductase GHRB Arabidopsis thaliana (thale cress) Eukaryotes hydroxypyruvate, glyoxylate hydroxypyruvate PMID:18952776
HPR2_ARATH glyoxylate/hydroxypyruvate reductase A HPR2 GHRB Arabidopsis thaliana (thale cress) Eukaryotes hydroxypyruvate, glyoxylate hydroxypyruvate PMID:18952776
A2Q988_ASPNC An01g07030; 2-hydroxyacid dehydrogenase UNK4.10 GHRB Aspergillus niger Eukaryotes - - -
A2QH07_ASPNC An03g05150; D-mandelate dehydrogenase GHRB Aspergillus niger Eukaryotes - - -
A2QU03_ASPNC An09g03890; 2-hydroxyacid dehydrogenase UNK4.10 GHRB Aspergillus niger Eukaryotes - - -
A2QX18_ASPNC An11g07270; 2-hydroxyacid dehydrogenase UNK4.10 GHRB Aspergillus niger Eukaryotes - - -
A2R1X3_ASPNC An13g02770; D-mandelate dehydrogenase GHRB Aspergillus niger Eukaryotes - - -
TKRA_BACSU yvcT; 2-ketogluconate reductase (EC:1.1.1.-) GHRB Bacillus subtilis subsp. subtilis 168 Bacteria - - -
Q7VTJ3_BORPE D-isomer specific 2-hydroxyacid dehydrogenase GHRB Bordetella pertussis Tohama I Bacteria - - -
bta:100337413 glyoxylate reductase/hydroxypyruvate reductase GHRB Bos taurus (cow) Eukaryotes - - -
F1MB84_BOVIN GRHPR; glyoxylate reductase/hydroxypyruvate reductase GHRB Bos taurus (cow) Eukaryotes - - -
G3N069_BOVIN uncharacterized LOC515578 GHRB Bos taurus (cow) Eukaryotes - - -
Q8YEC6_BRUME 2-hydroxyacid dehydrogenase (EC:1.1.1.215) GHRB Brucella melitensis bv. 1 16M Bacteria - - -
Q8YD64_BRUME glycerate dehydrogenase (EC:1.1.1.215) GHRB Brucella melitensis bv. 1 16M Bacteria - - -
bma:BMA0513 2-hydroxyacid dehydrogenase GHRB Burkholderia mallei ATCC 23344 Bacteria - - -
A0A0H2WC66_BURMA 2-hydroxyacid dehydrogenase GHRB Burkholderia mallei ATCC 23344 Bacteria - - -
GYAR_KORCO glyoxylate reductase (EC:1.1.1.26) GHRB Candidatus Korarchaeum cryptofilum Archaea - - -
DHGY_CUCSA Glycerate dehydrogenase GHRB Cucumis sativus (cucumber) Eukaryotes hydroxypyruvate, glyoxylate hydroxypyruvate PMID:16663015
B1WSC2_CYAA5 D-isomer specific 2-hydroxyacid dehydrogenase GHRB Cyanothece sp. ATCC 51142 Bacteria - - -
Q504F9_DANRE grhpra, grhpr, si:ch211-240l14.3, zgc:109900; glyoxylate reductase/hydroxypyruvate reductase a (EC:1.1.1.79) GHRB Danio rerio (zebrafish) Eukaryotes - - -
Q6P0V7_DANRE grhprb, fb80f04, wu:fb80f04, zgc:77636; glyoxylate reductase/hydroxypyruvate reductase b GHRB Danio rerio (zebrafish) Eukaryotes - - -
Q1JPX9_DANRE im:7137941; zgc:136493 GHRB Danio rerio (zebrafish) Eukaryotes - - -
D3PA38_DEFDS D-isomer specific 2-hydroxyacid dehydrogenase catalytic component GHRB Deferribacter desulfuricans Bacteria - - -
Q24Q83_DESHY hypothetical protein GHRB Desulfitobacterium hafniense Y51 Bacteria - - -
Q24WY0_DESHY hypothetical protein GHRB Desulfitobacterium hafniense Y51 Bacteria - - -
Q24RW1_DESHY hypothetical protein GHRB Desulfitobacterium hafniense Y51 Bacteria - - -
TKRA_DICDI tkrA; 2-keto-D-gluconate reductase GHRB Dictyostelium discoideum (cellular slime mold) Eukaryotes - - -
Q8I725_DROME CG1236 gene product from transcript CG1236-RA (EC:1.1.1.95) GHRB Drosophila melanogaster (fruit fly) Eukaryotes - - -
X2J9A5_DROME CG31673 gene product from transcript CG31673-RB (EC:1.1.1.79) GHRB Drosophila melanogaster (fruit fly) Eukaryotes - - -
Q8INU6_DROME CG31674 gene product from transcript CG31674-RA (EC:1.1.1.79) GHRB Drosophila melanogaster (fruit fly) Eukaryotes - - -
Q7KT11_DROME CG9331 gene product from transcript CG9331-RK (EC:1.1.1.-) GHRB Drosophila melanogaster (fruit fly) Eukaryotes - - -
GHRB_ECOLI ghrB; glyoxylate/hydroxypyruvate reductase B (EC:1.1.1.215 1.1.1.79) GHRB Escherichia coli K-12 MG1655 Bacteria hydroxypyruvate, 2-oxo-D-gluconate, glyoxylate hydroxypyruvate PMID:11237876
A5FIN4_FLAJ1 D-isomer specific 2-hydroxyacid dehydrogenase GHRB Flavobacterium johnsoniae Bacteria - - -
gga:426806 GRHPR; glyoxylate reductase/hydroxypyruvate reductase GHRB Gallus gallus (chicken) Eukaryotes - - -
gga:420808 probable 2-ketogluconate reductase-like GHRB Gallus gallus (chicken) Eukaryotes - - -
E1BRZ5_CHICK uncharacterized LOC420807 GHRB Gallus gallus (chicken) Eukaryotes - - -
Q5KVN6_GEOKA 2-hydroxyacid dehydrogenase GHRB Geobacillus kaustophilus Bacteria - - -
2KGR_GLUOX 2-ketogluconate reductase GHRB Gluconobacter oxydans 621H Bacteria 2-keto-D-gluconate, 2-keto-L-gulonate 2-keto-D-gluconate PMID:20676631
GRHPR_HUMAN GRHPR, GLXR, GLYD, PH2; glyoxylate reductase/hydroxypyruvate reductase (EC:1.1.1.79 1.1.1.81) GHRB Homo sapiens (human) Eukaryotes hydroxypyruvate, glyoxylate hydroxypyruvate PMID:16198644 2GCG (NADP; 2,3‑dihydroxypropanoic acid) PMID:16756993
2H1S
2Q50 PMID:17850744
2WWR PMID:16756993
DHGY_HYPME Glycerate dehydrogenase GHRB Hyphomicrobium methylovorum Bacteria hydroxypyruvate, glyoxylate hydroxypyruvate PMID:3830156 1GDH PMID:8120891
E3F052_KETVY D-2-hydroxyacid dehydrogensase protein GHRB Ketogulonicigenium vulgare Bacteria - - - 4LSW PMID:24068509
A6TI50_KLEP7 Phosphonate dehydrogenase (NAD-dependent phosphite dehydrogenase) GHRB Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Bacteria - - -
GHRB_KLEP7 tkrA; 2-hydroxyacid dehydrogenase GHRB Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Bacteria - - -
F9UM06_LACPL 2-hydroxyacid dehydrogenase GHRB Lactobacillus plantarum WCFS1 Bacteria - - -
Q5ZS40_LEGPH D-isomer specific 2-hydroxyacid dehydrogenase GHRB Legionella pneumophila subsp. pneumophila Philadelphia 1 Bacteria - - -
Q8YAN9_LISMO phosphoglycerate dehydrogenase GHRB Listeria monocytogenes EGD-e Bacteria - - -
Q3T9Z2_MOUSE Grhpr, 1110059D05Rik, 6430629L09Rik; glyoxylate reductase/hydroxypyruvate reductase (EC:1.1.1.79 1.1.1.81) GHRB Mus musculus (mouse) Eukaryotes - - -
A7RL06_NEMVE hypothetical protein GHRB Nematostella vectensis (sea anemone) Eukaryotes - - -
A7S382_NEMVE hypothetical protein GHRB Nematostella vectensis (sea anemone) Eukaryotes - - -
A7STU2_NEMVE hypothetical protein GHRB Nematostella vectensis (sea anemone) Eukaryotes - - -
A7RZX5_NEMVE hypothetical protein GHRB Nematostella vectensis (sea anemone) Eukaryotes - - -
A7STU0_NEMVE hypothetical protein GHRB Nematostella vectensis (sea anemone) Eukaryotes - - -
A9A5A9_NITMS glyoxylate reductase (EC:1.1.1.26) GHRB Nitrosopumilus maritimus Archaea - - -
Q8YK31_NOSS1 glycerate dehydrogenase GHRB Nostoc sp. PCC 7120 Bacteria - - -
Q8W0A4_ORYSJ Os01g0228600 GHRB Oryza sativa japonica (Japanese rice) (RefSeq) Eukaryotes - - -
Q6YU90_ORYSJ Os02g0101500 GHRB Oryza sativa japonica (Japanese rice) (RefSeq) Eukaryotes - - -
Q7X6P0_ORYSJ Os04g0106400 GHRB Oryza sativa japonica (Japanese rice) (RefSeq) Eukaryotes - - -
Q0JFF8_ORYSJ Os04g0107200 GHRB Oryza sativa japonica (Japanese rice) (RefSeq) Eukaryotes - - -
Q7XRA3_ORYSJ Os04g0107300 GHRB Oryza sativa japonica (Japanese rice) (RefSeq) Eukaryotes - - -
Q7XRA2_ORYSJ Os04g0107500 GHRB Oryza sativa japonica (Japanese rice) (RefSeq) Eukaryotes - - -
C6CWW4_PAESJ D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding GHRB Paenibacillus sp. JDR-2 Bacteria - - -
D4GFY0_PANAM tkrA; TkrA GHRB Pantoea ananatis LMG 20103 Bacteria - - -
HPPR_PLESU Hydroxyphenylpyruvate reductase GHRB Plectranthus scutellarioides Eukaryotes phenylpyruvate, 3,4-dihydroxyphenylpyruvate, 4-hydroxyphenylpyruvate 3,4-dihydroxyphenylpyruvate PMID:15284489 3BA1 PMID:20445235
3BAZ (NADP) PMID:20445235
Q120R1_POLSJ D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding GHRB Polaromonas sp. Bacteria - - - 4G2N
Q6A5K9_PROAC D-isomer specific 2-hydroxyacid dehydrogenase, putative D-3-phosphoglycerate dehydrogenase (EC:1.1.1.95) GHRB Propionibacterium acnes KPA171202 Bacteria - - -
G3XCL1_PSEAI 2-hydroxyacid dehydrogenase GHRB Pseudomonas aeruginosa PAO1 Bacteria - - -
Q9HXB7_PSEAE 2-hydroxyacid dehydrogenase GHRB Pseudomonas aeruginosa PAO1 Bacteria - - -
PTXD_PSEST Phosphonate dehydrogenase GHRB Pseudomonas stutzeri Bacteria phosphonate, hydroxypyruvate phosphonate PMID:11278981 4E5K (NAD, sulfite ion) PMID:22564171
4E5M (NADP) PMID:22564171
4E5N (NAD) PMID:22564171
4E5P (NAD) PMID:22564171
4EBF (NAD) PMID:22564171
4NU5 (NAD) PMID:24498026
4NU6 (NAD, sulfate ion) PMID:24498026
Q8ZXX8_PYRAE D-3-phosphoglycerate dehydrogenase GHRB Pyrobaculum aerophilum Archaea - - -
GYAR_PYRFU Glyoxylate reductase GHRB Pyrococcus furiosus Archaea - - - 5AOV (NADP, glyoxylic acid) PMID:26865263
GYAR_PYRHO PH0597; 376aa long hypothetical dehydrogenase GHRB Pyrococcus horikoshii Archaea hydroxypyruvate, glyoxylate hydroxypyruvate PMID:17327673 2DBQ (NADP, sulfate ion) PMID:17327673
2DBR (NADP, sulfate ion) PMID:17327673
2DBZ (NADP, sulfate ion) PMID:17327673
F8AEA4_PYRYC Glyoxylate reductase GHRB Pyrococcus yayanosii Archaea - - - 5AOW (NADP; 2,3‑dihydroxypropanoic acid) PMID:26865263
Q8Y0K9_RALSO hypothetical oxidoreductase protein (EC:1.1.-.-) GHRB Ralstonia solanacearum GMI1000 Bacteria - - -
Q8XRB3_RALSO probable dehydrogenase oxidoreductase protein (EC:1.1.-.-) GHRB Ralstonia solanacearum GMI1000 Bacteria - - -
Q8XSH1_RALSO putative d-3-phosphoglycerate dehydrogenase; oxidoreductase protein (EC:1.1.1.95) GHRB Ralstonia solanacearum GMI1000 Bacteria - - -
Q2K460_RHIEC 2-hydroxyacid dehydrogenase family protein GHRB Rhizobium etli CFN 42 Bacteria - - -
Q2KDX3_RHIEC D-2-hydroxyacid dehydrogenase GHRB Rhizobium etli CFN 42 Bacteria - - -
Q2K1I6_RHIEC D-2-hydroxyacid dehydrogensase GHRB Rhizobium etli CFN 42 Bacteria - - -
Q7LLW9_RHOGR D-mandelate dehydrogenase GHRB Rhodotorula graminis Eukaryotes D-mandalate, phenylglyoxylate D-mandalate 10.1099/00221287-135-7-2035, PMID:25449542 2W2L (NAD, sulfate ion)
2W2K
GOR1_YEAST GOR1; Gor1p (EC:1.1.1.26) GHRB Saccharomyces cerevisiae (budding yeast) Eukaryotes hydroxypyruvate, 2-hydroxyisocaproate, glyoxylate glyoxylate PMID:19681174
YP113_YEAST glyoxylate reductase (EC:1.-.-.-) GHRB Saccharomyces cerevisiae (budding yeast) Eukaryotes - - -
YGT5_YEAST putative hydroxyacid dehydrogenase (EC:1.-.-.-) GHRB Saccharomyces cerevisiae (budding yeast) Eukaryotes - - -
GHRB_SALTI yiaE; 2-hydroxyacid dehydrogenase GHRB Salmonella enterica subsp. enterica serovar Typhi CT18 Bacteria - - -
Q92MX8_RHIME 2-hydroxyacid dehydrogenase GHRB Sinorhizobium meliloti 1021 Bacteria - - -
Q92T15_RHIME 2-hydroxyacid dehydrogenase (EC:1.1.1.-) GHRB Sinorhizobium meliloti 1021 Bacteria - - -
Q930D0_RHIME D-isomer specific 2-hydroxyacid dehydrogenase GHRB Sinorhizobium meliloti 1021 Bacteria - - -
Q92XS7_RHIME dehydrogenase GHRB Sinorhizobium meliloti 1021 Bacteria - - -
Q92X49_RHIME dehydrogenase GHRB Sinorhizobium meliloti 1021 Bacteria - - -
Q92LZ4_RHIME glycerate dehydrogenase GHRB Sinorhizobium meliloti 1021 Bacteria glyoxylate, hydroxypyruvate, 2-keto-D-gluconate, hydroxyphenylpyruvate hydroxypyruvate PMID:29309127 5V7N (NADP, 2‑keto‑D‑gluconic acid) PMID:29309127
5J23 (2′‑monophosphoadenosine‑5′‑diphosphoribose (A2R)) PMID:29309127
5UOG PMID:29309127
5V6Q (NADP, malonic acid) PMID:29309127
5V72 PMID:29309127
5V7G (NADP, oxalate ion) PMID:29309127
Q931A1_RHIME Dehydrogenase GHRB Sinorhizobium meliloti 1021 Bacteria - - - 4DGS
sau:SA2098 glycerate dehydrogenase GHRB Staphylococcus aureus subsp. aureus N315 (MRSA/VSSA) Bacteria - - -
sau:SA0791 hypothetical protein GHRB Staphylococcus aureus subsp. aureus N315 (MRSA/VSSA) Bacteria - - -
GYAR_THEKO glyoxylate reductase (EC:1.1.1.26) GHRB Thermococcus kodakarensis Archaea - - -
GYAR_THELN Glyoxylate reductase GHRB Thermococcus litoralis Archaea hydroxypyruvate, phenylpyruvate, pyruvate, glyoxylate glyoxylate PMID:11532010
Q5SMG6_THET8 glycerate dehydrogenase/glyoxylate reductase GHRB Thermus thermophilus HB27 Bacteria - - - 2CUK
F1T2J9_9ASCO Phenylpyruvate reductase GHRB Wickerhamia fluorescens Eukaryotes hydroxypyruvate, pyruvate, 4-hydroxyphenylpyruvate, phenylpyruvate, glyoxylate, benzylformate, oxaloacetate phenylpyruvate PMID:21672638
Q8P7R1_XANCP 2-hydroxyacid dehydrogenase GHRB Xanthomonas campestris pv. campestris ATCC 33913 Bacteria - - -
A1L3E9_XENLA glyoxylate reductase/hydroxypyruvate reductase-like protein GHRB Xenopus laevis (African clawed frog) Eukaryotes - - -
Q6NTU8_XENLA grhpr.1, glxr, glyd; glyoxylate reductase/hydroxypyruvate reductase, gene 1 GHRB Xenopus laevis (African clawed frog) Eukaryotes - - -
Q498I1_XENLA grhpr.2; glyoxylate reductase/hydroxypyruvate reductase, gene 2 (EC:1.1.1.79) GHRB Xenopus laevis (African clawed frog) Eukaryotes - - -
A0A0B6NZT4_YERPE D-isomer specific 2-hydroxyacid dehydrogenase GHRB Yersinia pestis CO92 (biovar Orientalis) Bacteria - - -
A0A0B6NH52_YERPE D-isomer specific 2-hydroxyacid dehydrogenase family protein (EC:1.1.1.81) GHRB Yersinia pestis CO92 (biovar Orientalis) Bacteria - - -
Q5NR73_ZYMMO D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein GHRB Zymomonas mobilis subsp. mobilis ZM4 Bacteria - - -