Enzymes from the LDHD subfamily can be found in bacteria and some lower eukaryotes, such as protists, fungi and green algae. Bacterial proteins initially annotated as ᴅ-lactate dehydrogenases (LDHD, or ᴅ-LDH) act at the last step of glycolysis in anaerobic conditions by catalyzing the reduction of pyruvate to ᴅ-lactate, allowing regeneration of NAD+ from NADH. They may also play a role in other processes, as demonstrated for VanH, which is responsible for vancomycin resistance in Enterococcus faecium. The only eukaryotic ᴅ-LDH studied so far, the Chlamydomonas reinhardtii enzyme, was shown to reduce pyruvate in fermentation pathways in chloroplasts.
Accession | Protein name | Subfamily | Organism | Kingdom | Kinetically characterized substrates | Highest efficiency substrate | Structures |
---|---|---|---|---|---|---|---|
X7PKE1_ECOLX | - | LDHD | Escherichia coli O104:H4 | Bacteria | - | - - | 3WX0 |
D2RJU7_ACIFV | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein | LDHD | Acidaminococcus fermentans | Bacteria | - | - - | 1XDW |
Q3M9R3_ANAVT | D-lactate dehydrogenase (EC:1.1.1.28) | LDHD | Anabaena variabilis | Bacteria | - | - - | |
A2QA09_ASPNC | An01g09780; D-lactate dehydrogenase | LDHD | Aspergillus niger | Eukaryotes | - | - - | |
Q8A7E9_BACTN | D-lactate dehydrogenase | LDHD | Bacteroides thetaiotaomicron | Bacteria | - | - - | |
A0A0H2WJ57_BURMA | ldhA; D-lactate dehydrogenase (EC:1.1.1.28) | LDHD | Burkholderia mallei ATCC 23344 | Bacteria | - | - - | |
B0LUZ5_CHLRE | Putative D-lactate dehydrogenase | LDHD | Chlamydomonas reinhardtii | Eukaryotes | pyruvate, glyoxylate, lactate | pyruvate PMID:26574578 | 4ZGS (NAD) PMID:26574578 |
Q97FN7_CLOAB | D-lactate dehydrogenase | LDHD | Clostridium acetobutylicum ATCC 824 | Bacteria | - | - - | |
Q97IU7_CLOAB | lactate dehydrogenase | LDHD | Clostridium acetobutylicum ATCC 824 | Bacteria | - | - - | |
B1WXW4_CYAA5 | D-lactate dehydrogenase | LDHD | Cyanothece sp. ATCC 51142 | Bacteria | - | - - | |
LDHD_DICDI | ldhA; D-lactate dehydrogenase | LDHD | Dictyostelium discoideum (cellular slime mold) | Eukaryotes | - | - - | |
VANH_ENTFA | D-specific alpha-keto acid dehydrogenase | LDHD | Enterococcus faecalis V583 | Bacteria | - | - - | |
VANH_ENTFC | D-specific alpha-keto acid dehydrogenase | LDHD | Enterococcus faecium | Bacteria | 2-ketobutyrate, 2-ketovalerate, pyruvate, 2-ketoisocaproate, 2-ketocaproate, phenylpyruvate, 2-ketoisovalerate | pyruvate PMID:1931965 | |
LDHD_ECOLI | D-lactate dehydrogenase | LDHD | Escherichia coli K-12 MG1655 | Bacteria | pyruvate | pyruvate PMID:4297266, PMID:6393891 | 3WX0 |
A5FIM6_FLAJ1 | D-isomer specific 2-hydroxyacid dehydrogenase | LDHD | Flavobacterium johnsoniae | Bacteria | - | - - | |
Q8RG31_FUSNN | D-lactate dehydrogenase (EC:1.1.99.2) | LDHD | Fusobacterium nucleatum subsp. nucleatum ATCC 25586 | Bacteria | - | - - | |
Q8RG11_FUSNN | D-lactate dehydrogenase | LDHD | Fusobacterium nucleatum subsp. nucleatum ATCC 25586 | Bacteria | - | - - | 3WWY |
DDH_HAEIN | ldhA; D-lactate dehydrogenase | LDHD | Haemophilus influenzae Rd KW20 (serotype d) | Bacteria | - | - - | |
A6T8G0_KLEP7 | ldhA; D-lactate dehydrogenase | LDHD | Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | Bacteria | - | - - | |
Q03CR3_LACC3 | (R)-2-hydroxyisocaproate dehydrogenase | LDHD | Lactobacillus casei ATCC 334 | Bacteria | 2-ketobutyrate, lactate, pyruvate, 4-hydroxyphenylpyruvate, phenylpyruvate, 2-oobutanoate, 2-oxovalerate, 2-oxohexanoate | phenylpyruvate 10.1016/0141-0229(92)90022-G | |
Q1GAA2_LACDA | D-isomer specific 2-hydroxyacid dehydrogenase | LDHD | Lactobacillus delbrueckii subsp. bulgaricus | Bacteria | - | - - | 2YQ4 PMID:23110853 2YQ5 (NAD) PMID:23110853 |
LDHD_LACDA | D-lactate dehydrogenase | LDHD | Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 | Bacteria | 2-ketobutyrate, pyruvate, phenylpyruvate, glyoxylate, lactate, bromopyruvate, oxaloacetate | pyruvate PMID:1569100 | 1J49 (NAD) PMID:12054772 1J4A PMID:12054772 |
LDHD_LACHE | D-lactate dehydrogenase | LDHD | Lactobacillus helveticus | Bacteria | - | - - | 2DLD (NAD, oxamic acid) |
C4VLM6_9LACO | 4-phosphoerythronate dehydrogenase | LDHD | Lactobacillus jensenii 269-3 | Bacteria | - | - - | 4PRK |
DHD2_LACPA | D-2-hydroxyisocaproate dehydrogenase | LDHD | Lactobacillus paracasei | Bacteria | 2-keto-3-methylbutyrate, 2-keto-4-methylmercaptobutyrate, 2-ketobutyrate, 2-ketooctanoate, 2-ketovalerate, mercaptopyruvate, 2-ketoisocaproate, phenylpyruvate, 2-ketocaproate, 2-keto-3-methylvalerate | 2-ketoisocaproate 10.1007/BF00252354 | 1DXY (NAD, 2‑oxo‑4‑methylpentanoic acid) PMID:9126843 |
LDHD_LACPE | D-lactate dehydrogenase | LDHD | Lactobacillus pentosus | Bacteria | hydroxypyruvate, 2-ketobutyrate, 2-ketovalerate, pyruvate, 2-ketoisocaproate, 2-ketocaproate, phenylpyruvate, 2-ketoisovalerate | pyruvate PMID:12897026 | |
LDHD_LACPL | ldhD; D-lactate dehydrogenase | LDHD | Lactobacillus plantarum WCFS1 | Bacteria | hydroxypyruvate, 2-ketobutyrate, 2-ketovalerate, pyruvate, 2-ketoisocaproate, 2-ketocaproate, phenylpyruvate, 2-ketoisovalerate | pyruvate PMID:1840590 | |
F9UM82_LACPL | bifunctional protein: aminotransferase (pyridoxal-phosphate-dependent); 2-hydroxyacid dehydrogenase | LDHD | Lactobacillus plantarum WCFS1 | Bacteria | - | - - | |
LDHD_LEUMC | D-lactate dehydrogenase, LdhA | LDHD | Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 | Bacteria | phenylpyruvate, pyruvate, 2-ketobutyrate | pyruvate PMID:1931965 | |
Q03UK9_LEUMM | lactate dehydrogenase | LDHD | Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 | Bacteria | - | - - | |
Q03Z77_LEUMM | lactate dehydrogenase related 2-hydroxyacid dehydrogenase | LDHD | Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 | Bacteria | - | - - | |
Q03V58_LEUMM | lactate dehydrogenase related 2-hydroxyacid dehydrogenase | LDHD | Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 | Bacteria | - | - - | |
Q1CWE5_MYXXD | ldhA; D-lactate dehydrogenase (EC:1.1.1.28) | LDHD | Myxococcus xanthus | Bacteria | - | - - | |
A0A0U1RK09_NEIMA | D-lactate dehydrogenase (EC:1.1.1.28) | LDHD | Neisseria meningitidis Z2491 (serogroup A) | Bacteria | - | - - | |
Q8Z0N3_NOSS1 | D-lactate dehydrogenase | LDHD | Nostoc sp. PCC 7120 | Bacteria | - | - - | |
D4GF56_PANAM | ldhA; LdhA | LDHD | Pantoea ananatis LMG 20103 | Bacteria | - | - - | |
B7S4E4_PHATC | 2-hydroxyacid dehydrogenase | LDHD | Phaeodactylum tricornutum | Eukaryotes | - | - - | |
Q9I530_PSEAE | ldhA; D-lactate dehydrogenase | LDHD | Pseudomonas aeruginosa PAO1 | Bacteria | - | - - | 3WWZ |
Q8XUQ5_RALSO | ldhA; putative d-lactate dehydrogenase (d-ldh) oxidoreductase protein (EC:1.1.1.28) | LDHD | Ralstonia solanacearum GMI1000 | Bacteria | - | - - | |
Q8Z780_SALTI | D-lactate dehydrogenase | LDHD | Salmonella enterica subsp. enterica serovar Typhi CT18 | Bacteria | - | - - | 4CUK (NAD) 4CUJ |
A0A0M3KL04_9BACL | D-lactate dehydrogenase | LDHD | Sporolactobacillus inulinus CASD | Bacteria | - | - - | 4XKJ (NAD) |
sau:SA2346 | D-lactate dehydrogenase (EC:1.1.1.28) | LDHD | Staphylococcus aureus subsp. aureus N315 (MRSA/VSSA) | Bacteria | - | - - | |
sau:SA2312 | ddh; D-lactate dehydrogenase (EC:1.1.1.28) | LDHD | Staphylococcus aureus subsp. aureus N315 (MRSA/VSSA) | Bacteria | - | - - | |
LDHD_STRP1 | ddh; D-lactate dehydrogenase (EC:1.1.1.28) | LDHD | Streptococcus pyogenes SF370 (serotype M1) | Bacteria | - | - - | |
Q9XAK8_STRCO | dldh, SC66T3.05; D-lactate dehydrogenase | LDHD | Streptomyces coelicolor | Bacteria | - | - - | |
Q9S2M5_STRCO | dldh2, SCE10.12c; D-lactate dehydrogenase | LDHD | Streptomyces coelicolor | Bacteria | - | - - | |
syn:slr1556 | ddh; D-lactate dehydrogenase | LDHD | Synechocystis sp. PCC 6803 | Bacteria | - | - - | |
LDHD_TREPA | D-specific D-2-hydroxyacid dehydrogenase | LDHD | Treponema pallidum subsp. pallidum Nichols | Bacteria | - | - - | |
Q9KMX4_VIBCH | D-lactate dehydrogenase | LDHD | Vibrio cholerae O1 biovar El Tor N16961 | Bacteria | - | - - | |
A0A0B6P5V7_YERPE | hslI; D-lactate dehydrogenase (EC:1.1.1.28) | LDHD | Yersinia pestis CO92 (biovar Orientalis) | Bacteria | - | - - | |
DDH_ZYMMO | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein | LDHD | Zymomonas mobilis subsp. mobilis ZM4 | Bacteria | - | - - |